Class SequenceHandler¶

Defined in File SequenceHandler.h

Inheritance Relationships¶

Base Types¶

public SmartPeak::ParametersObservable (Class ParametersObservable)
public SmartPeak::WorkflowObservable (Class WorkflowObservable)
public SmartPeak::SequenceObservable (Class SequenceObservable)
public SmartPeak::TransitionsObservable (Class TransitionsObservable)
public SmartPeak::FeaturesObservable (Class FeaturesObservable)
public SmartPeak::SequenceSegmentObservable (Class SequenceSegmentObservable)
public SmartPeak::SpectraLibraryObservable (Class SpectraLibraryObservable)

Class Documentation¶

class SequenceHandler : public SmartPeak::ParametersObservable, public SmartPeak::WorkflowObservable, public SmartPeak::SequenceObservable, public SmartPeak::TransitionsObservable, public SmartPeak::FeaturesObservable, public SmartPeak::SequenceSegmentObservable, public SmartPeak::SpectraLibraryObservable ¶

Public Functions

void clear()¶

void setSequence(const std::vector<InjectionHandler> &sequence)¶

std::vector<InjectionHandler> &getSequence()¶

const std::vector<InjectionHandler> &getSequence() const¶

void setSequenceSegments(const std::vector<SequenceSegmentHandler> &sequence_segments)¶

std::vector<SequenceSegmentHandler> &getSequenceSegments()¶

const std::vector<SequenceSegmentHandler> &getSequenceSegments() const¶

void setSampleGroups(const std::vector<SampleGroupHandler> &sample_groups)¶

std::vector<SampleGroupHandler> &getSampleGroups()¶

const std::vector<SampleGroupHandler> &getSampleGroups() const¶

void addSampleToSequence(const MetaDataHandler &meta_data_I, const OpenMS::FeatureMap &featureMap_I)¶

void setWorkflow(const std::vector<std::string> &commands)¶

std::vector<std::string> &getWorkflow()¶

const std::vector<std::string> &getWorkflow() const¶

std::vector<InjectionHandler> getSamplesInSequence(const std::set<std::string> &injection_names) const¶

std::string getRawDataFilesInfo() const¶

std::string getAnalyzedFeaturesInfo() const¶

std::string getSelectedFeaturesInfo() const¶

std::string getPickedPeaksInfo() const¶

std::string getFilteredSelectedPeaksInfo() const¶

Public Static Functions

static CastValue getMetaValue(const OpenMS::Feature &feature, const OpenMS::Feature &subordinate, const std::string &meta_value)¶