Struct EstimateFeatureRSDs

Inheritance Relationships

Base Type

Struct Documentation

struct EstimateFeatureRSDs : public SmartPeak::SequenceSegmentProcessor

Public Functions

inline virtual std::string getName() const override

Get the processor struct name

inline virtual std::string getDescription() const override

Get the processor struct description

virtual ParameterSet getParameterSchema() const override

Get the Schema (possible, default parameters) of the processor.

virtual std::vector<std::string> getFilenameRequirements() const override

Returns the list of file ids that has to be defined prior to be process.

virtual std::set<std::string> getOutputs() const override

Returns the list of data type produced as output.

virtual std::set<std::string> getInputs() const override

Returns the list of data type accepted as input.

virtual void doProcess(SequenceSegmentHandler &sequenceSegmentHandler_IO, const SequenceHandler &sequenceHandler_I, const ParameterSet &params_I, Filenames &filenames_I) const override

Estimate the RSD for component and component group feature filter attributes from pooled QC samples

NOTE: estimation from replicate Unknown samples is not yet implemented