Class RunWorkflow¶

Defined in File Task.h

Inheritance Relationships¶

Base Types¶

public SmartPeak::cli::Task (Class Task)
public SmartPeak::IApplicationProcessorObserver (Struct IApplicationProcessorObserver)
public SmartPeak::ISequenceProcessorObserver (Struct ISequenceProcessorObserver)
public SmartPeak::ISequenceSegmentProcessorObserver (Struct ISequenceSegmentProcessorObserver)
public SmartPeak::ISampleGroupProcessorObserver (Struct ISampleGroupProcessorObserver)

Class Documentation¶

class RunWorkflow : public SmartPeak::cli::Task, public SmartPeak::IApplicationProcessorObserver, public SmartPeak::ISequenceProcessorObserver, public SmartPeak::ISequenceSegmentProcessorObserver, public SmartPeak::ISampleGroupProcessorObserver ¶

Public Functions

virtual bool operator()(ApplicationManager &application_manager) override¶

Executes the task.

Parameters: application_manager – reference to ApplicationManager instance

inline virtual void onApplicationProcessorStart(const std::vector<std::string> &commands) override¶: IApplicationProcessorObserver

inline virtual void onApplicationProcessorCommandStart(size_t command_index, const std::string &command_name) override¶

inline virtual void onApplicationProcessorCommandEnd(size_t command_index, const std::string &command_name) override¶

inline virtual void onApplicationProcessorEnd() override¶

inline virtual void onApplicationProcessorError(const std::string &error) override¶

inline virtual void onSequenceProcessorStart(const size_t nb_injections) override¶: ISequenceProcessorObserver

inline virtual void onSequenceProcessorSampleStart(const std::string &sample) override¶

inline virtual void onSequenceProcessorSampleEnd(const std::string &sample) override¶

inline virtual void onSequenceProcessorEnd() override¶

inline virtual void onSequenceProcessorError(const std::string &sample_name, const std::string &processor_name, const std::string &error) override¶

inline virtual void onSequenceSegmentProcessorStart(const size_t nb_segments) override¶: ISequenceSegmentProcessorObserver

inline virtual void onSequenceSegmentProcessorSampleStart(const std::string &segment_name) override¶

inline virtual void onSequenceSegmentProcessorSampleEnd(const std::string &segment_name) override¶

inline virtual void onSequenceSegmentProcessorEnd() override¶

inline virtual void onSequenceSegmentProcessorError(const std::string &segment_name, const std::string &processor_name, const std::string &error) override¶

inline virtual void onSampleGroupProcessorStart(const size_t nb_groups) override¶: ISampleGroupProcessorObserver

inline virtual void onSampleGroupProcessorSampleStart(const std::string &group_name) override¶

inline virtual void onSampleGroupProcessorSampleEnd(const std::string &group_name) override¶

inline virtual void onSampleGroupProcessorEnd() override¶

inline virtual void onSampleGroupProcessorError(const std::string &group_name, const std::string &processor_name, const std::string &error) override¶